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motifmatchr - Fast Motif Matching in R
Quickly find motif matches for many motifs and many sequences. Wraps C++ code from the MOODS motif calling library, which was developed by Pasi Rastas, Janne Korhonen, and Petri Martinmäki.
Last updated
motifannotationcpp
8.69 score 6 dependents 1.4k scripts 3.7k downloadschromVAR - Chromatin Variation Across Regions
Determine variation in chromatin accessibility across sets of annotations or peaks. Designed primarily for single-cell or sparse chromatin accessibility data, e.g. from scATAC-seq or sparse bulk ATAC or DNAse-seq experiments.
Last updated
singlecellsequencinggeneregulationimmunooncologycpp
5.67 score 10 scripts 3.1k downloads